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Re: [grouper-dev] DB problem - some broken groups - help appreciated.


Chronological Thread 
  • From: "Gettes, Michael" <>
  • To: Shilen Patel <>
  • Cc: "" <>
  • Subject: Re: [grouper-dev] DB problem - some broken groups - help appreciated.
  • Date: Fri, 31 May 2019 20:49:34 +0000

and it does iterate a few times. I don’t think this is going to fix these
problems.

can you offer advice on what i should be deleting out of grouper_group_set?
I am pretty fBM is not going to fix this issue.

/mrg

> On May 31, 2019, at 4:36 PM, Gettes, Michael <> wrote:
>
> I run findBadMemberships as Other_JOB. I will keep running it until it
> says no bad memberships. Maybe that will fix it?
>
> /mrg
>
>> On May 31, 2019, at 4:21 PM, Shilen Patel <> wrote:
>>
>> I wonder why it’s finding so many issues. If you run it again, does it
>> find more? You can run it via the daemon which would keep running it
>> until it doesn’t find anymore (or quit after 4 attempts). Before going
>> into the db and deleting rows out of grouper_group_set, it would be good
>> to know if this fixes it or not.
>>
>> Thanks!
>>
>> - Shilen
>>
>>
>> On 5/31/19, 4:03 PM, "Gettes, Michael" <> wrote:
>>
>> Shilen - findBadMemberships found 3 bad or missing this time around.
>>
>> Re-ran the loader job again and i still get the 14-ish errored groups as
>> before.
>>
>> /mrg
>>
>>> On May 31, 2019, at 2:49 PM, Gettes, Michael <> wrote:
>>>
>>> at 2:56am this morning findBadMemberships reported:
>>>
>>> Found 8 bad or missing memberships. Fixing and will try again. Found 1
>>> bad or missing memberships. Fixing and will try again. Found 42 bad or
>>> missing memberships. Fixing and will try again. Found 0 bad or missing
>>> memberships.
>>>
>>> running it again.
>>>
>>> /mrg
>>>
>>>> On May 31, 2019, at 2:47 PM, Gettes, Michael <> wrote:
>>>>
>>>> my last response was before I read this. running findBadMemberships now
>>>> which runs every nite at 2am.
>>>>
>>>> Carey - i hope my previous response sorta answers your questions.
>>>>
>>>> /mrg
>>>>
>>>>> On May 31, 2019, at 2:43 PM, Shilen Patel <> wrote:
>>>>>
>>>>> Have you tried to run findBadMemberships()? Depending on what the
>>>>> group set issue is, that may or may not help.
>>>>>
>>>>> - Shilen
>>>>>
>>>>> On 5/31/19, 1:43 PM, " on behalf of
>>>>> Gettes, Michael" < on behalf of
>>>>> > wrote:
>>>>>
>>>>> I’m trying to decipher the error presented…
>>>>>
>>>>> Caused by: java.sql.BatchUpdateException: Cannot delete or update a
>>>>> parent row: a foreign key constraint fails
>>>>> (`grouper`.`grouper_group_set`, CONSTRAINT
>>>>> `fk_group_set_member_group_id` FOREIGN KEY (`member_group_id`)
>>>>> REFERENCES `grouper_groups` (`id`))
>>>>>
>>>>> I read this to imply there is a value in
>>>>> grouper_group_set.member_group_id that is not in grouper_groups.id.
>>>>> To prove, I ran a right outer join to find what’s in group_set that is
>>>>> not in groups
>>>>> select * from grouper.grouper_group_set gs
>>>>> right join grouper.grouper_groups g
>>>>> on gs.member_group_id = g.id
>>>>> where gs.member_group_id = null
>>>>>
>>>>> and got 0 records returned.
>>>>>
>>>>> i am not sure where the problem is - any guidance?
>>>>>
>>>>>> On May 31, 2019, at 11:16 AM, Gettes, Michael <> wrote:
>>>>>>
>>>>>> Hi all,
>>>>>>
>>>>>> I have a condition of about a dozen groups which cannot be modified or
>>>>>> deleted and the log snippet attached shows the error log for one of
>>>>>> these groups. First, I’d like to know how I fix these groups.
>>>>>> Second, the condition of how this occurred I am still trying to prove
>>>>>> but it seems to be related to whether or not memory is configured with
>>>>>> ms=mx. I haven’t been able to recreate what caused the condition in
>>>>>> the log snippet but the log snippet with ms=mx devolves into Garbarge
>>>>>> collection failures and the loader becoming unusable over time. With
>>>>>> ms<mx (8g<9g) the errors i see in the log snippet do not cause the
>>>>>> loader to become unusable over time. Anyway, I’d really appreciate
>>>>>> help fixing the bad groups based on the log.
>>>>>>
>>>>>> I decided not to post this to the grouper-users list because I don’t
>>>>>> want people thinking grouper is unstable and this could happen to
>>>>>> them. As you guys know, i have been doing some extreme things with
>>>>>> grouper to see what’s possible and find issues and i think these
>>>>>> “broken groups” are related to that work and the various memory
>>>>>> problems I was having.
>>>>>>
>>>>>> Thank you!
>>>>>>
>>>>>> /mrg
>>>>>>
>>>>>> <20190531-grouper-error.log>
>>>>>
>>>>>
>>>>>
>>>>
>>>
>>
>>
>>
>




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