perfSONAR User Q&A and Other Discussion

[Andrew Lake <>]

Hi,

Just to close loop on this, the issue should now be resolved. We pushed updated packages to our repos yesterday that corrected the dependency issues and should allow yum updates to complete again.

Thanks,

Andy

On June 18, 2020 at 11:49:00 AM, Laurie Zirkle () wrote:

Yes, add us to the list, the cron.daily/0yum-daily.cron failed on all 3 of my pS-PerfSONARs.

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Laurie Zirkle            E-mail: lat at vt dot edu

Virginia Tech            

NI&S SysOps              Voice: (540)231-6370

Systems Engineer              

Blacksburg VA 24061

On Thu, Jun 18, 2020 at 11:33 AM Joseph Ghobrial <> wrote:

Seeing this as well.

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Joseph Ghobrial
Co-Director Center for Research Computing
Office of Information Technology
Rice University

jghobrial @ rice.edu

x5190

On Thu, Jun 18, 2020 at 9:48 AM Tao Zhang <> wrote:

Got an issue with yum update on the perfsonar box, looks like something wrong with the package  jq-1.6.10-1.el7.x86_64

Loaded plugins: fastestmirror, langpacks

Loading mirror speeds from cached hostfile

 * base: mirror.csclub.uwaterloo.ca

 * epel: mirror.siena.edu

 * extras: mirror.csclub.uwaterloo.ca

 * perfSONAR: mirror.chpc.utah.edu

 * updates: mirror.csclub.uwaterloo.ca

Resolving Dependencies

--> Running transaction check

---> Package oniguruma.x86_64 0:5.9.5-3.el7 will be updated

--> Processing Dependency: libonig.so.2()(64bit) for package: jq-1.6.10-1.el7.x86_64

---> Package oniguruma.x86_64 0:6.8.2-1.el7 will be an update

--> Finished Dependency Resolution

Error: Package: jq-1.6.10-1.el7.x86_64 (@perfSONAR)

           Requires: libonig.so.2()(64bit)

           Removing: oniguruma-5.9.5-3.el7.x86_64 (@epel)

               libonig.so.2()(64bit)

           Updated By: oniguruma-6.8.2-1.el7.x86_64 (epel)

              ~libonig.so.5()(64bit)

 You could try using --skip-broken to work around the problem

 You could try running: rpm -Va --nofiles --nodigest

Tao

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