ICN

[Alex Feltus <>]

Hello Stephen/John et al. 

Via ICN, I could move cancer data from Genomic Data Commons (GDC) and/or plant/animal genomics data from NCBI into my systems biology workflows launched via osg-connect or Clemson’s Palmetto cluster.   We already use both data sources as we study lots of species: Condoleezza Rice, rice, and mice. 

 

I see no reason why we cannot transfer data we would transfer anyway with your experimental network.  Creative workflow-specific solutions can be piloted from either data source and mapped to the other. 

 

Clearly, I don't understand the ICN protocol and need a demo.  I now understand that there can be no IP based applications. 

 

Whenever y'all are ready, I suggest we have a DOMAIN SCIENTIST oriented call separate from the TECHNICAL/ENGINEER call detailed below.  I would be happy to overview our science and provide a manifest of datasets from NCBI and/or GDC to discuss what is possible with ICN.

 

Alex

 

 

------

Alex Feltus, Ph.D.

CEO, Allele Systems LLC

Associate Professor, Clemson University Dept. Genetics & Biochemistry

Biosystems Research Complex Rm 302C

105 Collings Street Clemson, SC 29634, USA

864-656-3231 (office)

LinkedIn . Google Scholar

 

 

From: [mailto:] On Behalf Of John Hicks
Sent: Wednesday, January 25, 2017 10:38 AM
To:
Subject: ICN testbed networking POCs

 

Hello,

I would like to organize a call with the folks at each site who are responsible for the AL2S connection.  The goal is to come up with a plan/schedule for the deployment and identify individual organizations needs/issues.  Feel free to email this list or me directly to identify yourself as the point of contact and I will send out a doodle poll to find a time to meet.    

 

Best regards,

 

John Hicks, Internet2

+1 (317) 750-4765 (c)