2012-02-15 08:39:09,277: [main] DEBUG SourceManager.parseConfig(185) - - Instantiating new Digester. 2012-02-15 08:39:09,277: [main] DEBUG SourceManager.parseConfig(185) - - Instantiating new Digester. 2012-02-15 08:39:09,277: [main] DEBUG SourceManager.parseConfig(185) - - Instantiating new Digester. 2012-02-15 08:39:09,293: [main] DEBUG SourceManager.parseConfig(209) - - Parsing config input stream: java.io.BufferedInputStream@f0f11b8 2012-02-15 08:39:09,293: [main] DEBUG SourceManager.parseConfig(209) - - Parsing config input stream: java.io.BufferedInputStream@f0f11b8 2012-02-15 08:39:09,293: [main] DEBUG SourceManager.parseConfig(209) - - Parsing config input stream: java.io.BufferedInputStream@f0f11b8 2012-02-15 08:39:09,469: [main] DEBUG SourceManager.loadSource(159) - - Loading source: g:gsa 2012-02-15 08:39:09,469: [main] DEBUG SourceManager.loadSource(159) - - Loading source: g:gsa 2012-02-15 08:39:09,469: [main] DEBUG SourceManager.loadSource(159) - - Loading source: g:gsa 2012-02-15 08:39:09,474: [main] DEBUG SourceManager.loadSource(159) - - Loading source: grouperEntities 2012-02-15 08:39:09,474: [main] DEBUG SourceManager.loadSource(159) - - Loading source: grouperEntities 2012-02-15 08:39:09,474: [main] DEBUG SourceManager.loadSource(159) - - Loading source: grouperEntities 2012-02-15 08:39:09,480: [main] DEBUG BaseSourceAdapter.loadSearch(445) - - Loading search: searchSubject 2012-02-15 08:39:09,480: [main] DEBUG BaseSourceAdapter.loadSearch(445) - - Loading search: searchSubject 2012-02-15 08:39:09,480: [main] DEBUG BaseSourceAdapter.loadSearch(445) - - Loading search: searchSubject 2012-02-15 08:39:09,482: [main] DEBUG BaseSourceAdapter.loadSearch(445) - - Loading search: searchSubjectByIdentifier 2012-02-15 08:39:09,482: [main] DEBUG BaseSourceAdapter.loadSearch(445) - - Loading search: searchSubjectByIdentifier 2012-02-15 08:39:09,482: [main] DEBUG BaseSourceAdapter.loadSearch(445) - - Loading search: searchSubjectByIdentifier 2012-02-15 08:39:09,483: [main] DEBUG BaseSourceAdapter.loadSearch(445) - - Loading search: search 2012-02-15 08:39:09,483: [main] DEBUG BaseSourceAdapter.loadSearch(445) - - Loading search: search 2012-02-15 08:39:09,483: [main] DEBUG BaseSourceAdapter.loadSearch(445) - - Loading search: search 2012-02-15 08:39:09,485: [main] DEBUG SourceManager.loadSource(159) - - Loading source: ldap 2012-02-15 08:39:09,485: [main] DEBUG SourceManager.loadSource(159) - - Loading source: ldap 2012-02-15 08:39:09,485: [main] DEBUG SourceManager.loadSource(159) - - Loading source: ldap 2012-02-15 08:39:09,486: [main] DEBUG LdapSourceAdapter.init(102) - - ldap source init 2012-02-15 08:39:09,486: [main] DEBUG LdapSourceAdapter.init(102) - - ldap source init 2012-02-15 08:39:09,486: [main] DEBUG LdapSourceAdapter.init(102) - - ldap source init 2012-02-15 08:39:09,486: [main] DEBUG LdapSourceAdapter.initializeLdap(141) - - ldap initializeLdap 2012-02-15 08:39:09,486: [main] DEBUG LdapSourceAdapter.initializeLdap(141) - - ldap initializeLdap 2012-02-15 08:39:09,486: [main] DEBUG LdapSourceAdapter.initializeLdap(141) - - ldap initializeLdap 2012-02-15 08:39:09,487: [main] DEBUG LdapSourceAdapter.initializeLdap(155) - - reading properties file ldap.properties 2012-02-15 08:39:09,487: [main] DEBUG LdapSourceAdapter.initializeLdap(155) - - reading properties file ldap.properties 2012-02-15 08:39:09,487: [main] DEBUG LdapSourceAdapter.initializeLdap(155) - - reading properties file ldap.properties 2012-02-15 08:39:09,507: [main] DEBUG LdapSourceAdapter.initializeLdap(175) - - from properties file ldap.properties got edu.vt.middleware.ldap.LdapConfig@1431814845::env={java.naming.factory.initial=com.sun.jndi.ldap.LdapCtxFactory, edu.internet2.middleware.psp.peopleBaseDn=dc=psu,dc=edu, edu.internet2.middleware.psp.baseStem=ldaptest, edu.internet2.middleware.psp.groupObjectClass=groupOfNames, edu.internet2.middleware.psp.cnSourceAttributeID=name, edu.vt.middleware.ldap.pool.minPoolSize=2, edu.internet2.middleware.psp.groupsBaseDn=ou=groupstest,dc=psu,dc=edu, java.naming.provider.url=ldap://cprdev2.iam.psu.edu:389, edu.vt.middleware.ldap.pool.maxPoolSize=5, edu.internet2.middleware.psp.structure=flat} 2012-02-15 08:39:09,507: [main] DEBUG LdapSourceAdapter.initializeLdap(175) - - from properties file ldap.properties got edu.vt.middleware.ldap.LdapConfig@1431814845::env={java.naming.factory.initial=com.sun.jndi.ldap.LdapCtxFactory, edu.internet2.middleware.psp.peopleBaseDn=dc=psu,dc=edu, edu.internet2.middleware.psp.baseStem=ldaptest, edu.internet2.middleware.psp.groupObjectClass=groupOfNames, edu.internet2.middleware.psp.cnSourceAttributeID=name, edu.vt.middleware.ldap.pool.minPoolSize=2, edu.internet2.middleware.psp.groupsBaseDn=ou=groupstest,dc=psu,dc=edu, java.naming.provider.url=ldap://cprdev2.iam.psu.edu:389, edu.vt.middleware.ldap.pool.maxPoolSize=5, edu.internet2.middleware.psp.structure=flat} 2012-02-15 08:39:09,507: [main] DEBUG LdapSourceAdapter.initializeLdap(175) - - from properties file ldap.properties got edu.vt.middleware.ldap.LdapConfig@1431814845::env={java.naming.factory.initial=com.sun.jndi.ldap.LdapCtxFactory, edu.internet2.middleware.psp.peopleBaseDn=dc=psu,dc=edu, edu.internet2.middleware.psp.baseStem=ldaptest, edu.internet2.middleware.psp.groupObjectClass=groupOfNames, edu.internet2.middleware.psp.cnSourceAttributeID=name, edu.vt.middleware.ldap.pool.minPoolSize=2, edu.internet2.middleware.psp.groupsBaseDn=ou=groupstest,dc=psu,dc=edu, java.naming.provider.url=ldap://cprdev2.iam.psu.edu:389, edu.vt.middleware.ldap.pool.maxPoolSize=5, edu.internet2.middleware.psp.structure=flat} 2012-02-15 08:39:09,508: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.vt.middleware.ldap.pool.maxPoolSize 2012-02-15 08:39:09,508: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.vt.middleware.ldap.pool.maxPoolSize 2012-02-15 08:39:09,508: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.vt.middleware.ldap.pool.maxPoolSize 2012-02-15 08:39:09,509: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.baseStem 2012-02-15 08:39:09,509: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.baseStem 2012-02-15 08:39:09,509: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.baseStem 2012-02-15 08:39:09,509: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.vt.middleware.ldap.pool.minPoolSize 2012-02-15 08:39:09,509: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.vt.middleware.ldap.pool.minPoolSize 2012-02-15 08:39:09,509: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.vt.middleware.ldap.pool.minPoolSize 2012-02-15 08:39:09,510: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.groupObjectClass 2012-02-15 08:39:09,510: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.groupObjectClass 2012-02-15 08:39:09,510: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.groupObjectClass 2012-02-15 08:39:09,510: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.cnSourceAttributeID 2012-02-15 08:39:09,510: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.cnSourceAttributeID 2012-02-15 08:39:09,510: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.cnSourceAttributeID 2012-02-15 08:39:09,511: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.structure 2012-02-15 08:39:09,511: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.structure 2012-02-15 08:39:09,511: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.structure 2012-02-15 08:39:09,512: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.peopleBaseDn 2012-02-15 08:39:09,512: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.peopleBaseDn 2012-02-15 08:39:09,512: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.peopleBaseDn 2012-02-15 08:39:09,512: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.groupsBaseDn 2012-02-15 08:39:09,512: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.groupsBaseDn 2012-02-15 08:39:09,512: [main] DEBUG LdapSourceAdapter.initializeLdap(183) - - .. key = edu.internet2.middleware.psp.groupsBaseDn 2012-02-15 08:39:09,513: [main] DEBUG LdapSourceAdapter.initializeLdap(229) - - using the default socketfactory 2012-02-15 08:39:09,513: [main] DEBUG LdapSourceAdapter.initializeLdap(229) - - using the default socketfactory 2012-02-15 08:39:09,513: [main] DEBUG LdapSourceAdapter.initializeLdap(229) - - using the default socketfactory 2012-02-15 08:39:09,559: [main] DEBUG LdapSourceAdapter.initializeLdap(246) - - ldap initialize done 2012-02-15 08:39:09,559: [main] DEBUG LdapSourceAdapter.initializeLdap(246) - - ldap initialize done 2012-02-15 08:39:09,559: [main] DEBUG LdapSourceAdapter.initializeLdap(246) - - ldap initialize done 2012-02-15 08:39:09,643: [main] WARN ApiConfig.printConfigOnce(212) - - Grouper starting up: version: 2.1.0, build date: 2012/02/08 16:41:33, env: TEST grouper.properties read from: /usr/local/grouper-psp/grouper.apiBinary-2.1.0/conf/grouper.properties Grouper current directory is: /usr/local/grouper-psp/grouper.apiBinary-2.1.0/logs log4j.properties read from: /usr/local/grouper-psp/grouper.apiBinary-2.1.0/conf/log4j.properties Grouper logs are not using log4j: class org.apache.commons.logging.impl.SLF4JLocationAwareLog grouper.hibernate.properties: /usr/local/grouper-psp/grouper.apiBinary-2.1.0/conf/grouper.hibernate.properties grouper.hibernate.properties: grouper@jdbc:oracle:thin:@iam2.et-test.psu.edu:1521:xe sources.xml read from: /usr/local/grouper-psp/grouper.apiBinary-2.1.0/conf/sources.xml sources.xml groupersource id: g:gsa sources.xml ldap source id: ldap: ldap.properties sources.xml groupersource id: grouperEntities 2012-02-15 08:39:09,828: [main] DEBUG SourceManager.loadSource(159) - - Loading source: g:gsa 2012-02-15 08:39:09,828: [main] DEBUG SourceManager.loadSource(159) - - Loading source: g:gsa 2012-02-15 08:39:09,828: [main] DEBUG SourceManager.loadSource(159) - - Loading source: g:gsa 2012-02-15 08:39:09,829: [main] DEBUG SourceManager.loadSource(159) - - Loading source: g:isa 2012-02-15 08:39:09,829: [main] DEBUG SourceManager.loadSource(159) - - Loading source: g:isa 2012-02-15 08:39:09,829: [main] DEBUG SourceManager.loadSource(159) - - Loading source: g:isa 2012-02-15 08:39:15,777: [main] WARN GrouperCheckConfig.checkJar(234) - - jarfile mismatch, expecting name: 'subject.jar' size: 183159 manifest version: 2.1.0. However the jar detected is: /usr/local/grouper-psp/grouper.apiBinary-2.1.0/lib/grouper/subject.jar, name: subject.jar size: 183158 manifest version: 2.1.0 2012-02-15 08:39:15,999: [main] INFO EventLog.info(141) - - [f50e2e2dd66e4584aa556d12ee89bb82,'GrouperSystem','application'] session: start (139ms) 2012-02-15 08:39:16,061: [main] INFO EventLog.info(141) - - [473ae733fe5b4a19955c709f59360936,'GrouperSystem','application'] session: start (2ms) 2012-02-15 08:39:16,075: [main] INFO EventLog.info(141) - - [078cfad24af44b058b87fbaedfb93b05,'GrouperSystem','application'] session: start (1ms) 2012-02-15 08:39:16,147: [main] INFO EventLog.info(141) - - [618f64012394466e83d44035bc41e215,'GrouperSystem','application'] session: start (19ms) 2012-02-15 08:39:16,514: [main] INFO EventLog.info(141) - - [7462c0b4090c42cbb14c54db60f469aa,'GrouperSystem','application'] session: start (1ms) 2012-02-15 08:39:16,760: [main] INFO EventLog.info(141) - - [53b0ce5f207f425fad9c82d60c4eab41,'GrouperSystem','application'] session: start (1ms) 2012-02-15 08:39:16,767: [main] INFO EventLog.info(141) - - [5309333852994bb392e6e4edf1ba06a5,'GrouperSystem','application'] session: start (0ms) 2012-02-15 08:39:16,823: [main] DEBUG LdapSourceAdapter.getLdapResultsHelper(577) - - searchType: searchSubject filter: (uid=grouperTestSubjectByIdOnStartupASDFGHJ) 2012-02-15 08:39:16,823: [main] DEBUG LdapSourceAdapter.getLdapResultsHelper(577) - - searchType: searchSubject filter: (uid=grouperTestSubjectByIdOnStartupASDFGHJ) 2012-02-15 08:39:16,823: [main] DEBUG LdapSourceAdapter.getLdapResultsHelper(577) - - searchType: searchSubject filter: (uid=grouperTestSubjectByIdOnStartupASDFGHJ) 2012-02-15 08:39:16,827: [main] DEBUG LdapSourceAdapter.getLdapResultsHelper(577) - - searchType: searchSubjectByIdentifier filter: (uid=grouperTestSubjectByIdentifierOnStartupASDFGHJ) 2012-02-15 08:39:16,827: [main] DEBUG LdapSourceAdapter.getLdapResultsHelper(577) - - searchType: searchSubjectByIdentifier filter: (uid=grouperTestSubjectByIdentifierOnStartupASDFGHJ) 2012-02-15 08:39:16,827: [main] DEBUG LdapSourceAdapter.getLdapResultsHelper(577) - - searchType: searchSubjectByIdentifier filter: (uid=grouperTestSubjectByIdentifierOnStartupASDFGHJ) 2012-02-15 08:39:16,829: [main] DEBUG LdapSourceAdapter.getLdapResultsHelper(577) - - searchType: search filter: (cn=grouperTestStringOnStartupASDFGHJ) 2012-02-15 08:39:16,829: [main] DEBUG LdapSourceAdapter.getLdapResultsHelper(577) - - searchType: search filter: (cn=grouperTestStringOnStartupASDFGHJ) 2012-02-15 08:39:16,829: [main] DEBUG LdapSourceAdapter.getLdapResultsHelper(577) - - searchType: search filter: (cn=grouperTestStringOnStartupASDFGHJ) 2012-02-15 08:39:16,830: [main] DEBUG LdapSourceAdapter.searchHelper(392) - - set has 0 subjects 2012-02-15 08:39:16,830: [main] DEBUG LdapSourceAdapter.searchHelper(392) - - set has 0 subjects 2012-02-15 08:39:16,830: [main] DEBUG LdapSourceAdapter.searchHelper(392) - - set has 0 subjects 2012-02-15 08:39:16,862: [main] INFO EventLog.info(141) - - [414ac5ce0d564f3ab116c67513c3d092,'GrouperSystem','application'] session: start (2ms) 2012-02-15 08:39:16,864: [main] INFO EventLog.info(141) - - [3c76a6f88ac344ff90e55ab6d3aa8dd5,'GrouperSystem','application'] session: start (1ms) 2012-02-15 08:39:16,865: [main] INFO EventLog.info(141) - - [85131e779d4b42d681a3b822bae0a6ab,'GrouperSystem','application'] session: start (1ms) 2012-02-15 08:39:16,870: [main] INFO EventLog.info(141) - - [85131e779d4b42d681a3b822bae0a6ab,'GrouperSystem','application'] add group type: 'grouperLoader' (4ms) 2012-02-15 08:39:25,463: [main] INFO EventLog.info(141) - - [a8f5cf9f29a348e19d32e45e16c62ea9,'GrouperSystem','application'] session: start (2ms) 2012-02-15 08:39:44,997: [main] INFO EventLog.info(141) - - [81d42f86d81c4392b541fe9202fb155c,'GrouperSystem','application'] session: start (2ms) 2012-02-15 08:39:45,039: [main] DEBUG LdapSourceAdapter.getLdapResultsHelper(577) - - searchType: search filter: (cn=llg5) 2012-02-15 08:39:45,039: [main] DEBUG LdapSourceAdapter.getLdapResultsHelper(577) - - searchType: search filter: (cn=llg5) 2012-02-15 08:39:45,039: [main] DEBUG LdapSourceAdapter.getLdapResultsHelper(577) - - searchType: search filter: (cn=llg5) 2012-02-15 08:39:45,042: [main] ERROR LdapSourceAdapter.createSubject(425) - - No value for LDAP attribute "uid". It is Grouper attribute "SubjectID". 2012-02-15 08:39:45,042: [main] ERROR LdapSourceAdapter.createSubject(425) - - No value for LDAP attribute "uid". It is Grouper attribute "SubjectID". 2012-02-15 08:39:45,042: [main] ERROR LdapSourceAdapter.createSubject(425) - - No value for LDAP attribute "uid". It is Grouper attribute "SubjectID". 2012-02-15 08:39:45,044: [main] ERROR ShellHelper.eval(76) - - Sourced file: inline evaluation of: ``SubjectFinder.findAll("llg5");'' : Method Invocation SubjectFinder.findAll edu.internet2.middleware.subject.SourceUnavailableException: Exception with source: ldap, on query: 'llg5' at edu.internet2.middleware.grouper.subj.SourcesXmlResolver$5.callLogic(SourcesXmlResolver.java:759) at edu.internet2.middleware.grouper.subj.SourcesXmlResolver$5.callLogic(SourcesXmlResolver.java:744) at edu.internet2.middleware.grouper.subj.SourcesXmlResolver$LogLabelCallable.call(SourcesXmlResolver.java:155) at edu.internet2.middleware.grouper.subj.SourcesXmlResolver.executeCallables(SourcesXmlResolver.java:216) at edu.internet2.middleware.grouper.subj.SourcesXmlResolver.findAllHelper(SourcesXmlResolver.java:770) at edu.internet2.middleware.grouper.subj.SourcesXmlResolver.findAll(SourcesXmlResolver.java:718) at edu.internet2.middleware.grouper.subj.SourcesXmlResolver.findAll(SourcesXmlResolver.java:313) at edu.internet2.middleware.grouper.subj.CachingResolver.findAll(CachingResolver.java:143) at edu.internet2.middleware.grouper.subj.ValidatingResolver.findAll(ValidatingResolver.java:100) at edu.internet2.middleware.grouper.SubjectFinder.findAll(SubjectFinder.java:569) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at bsh.Reflect.invokeMethod(Unknown Source) at bsh.Reflect.invokeStaticMethod(Unknown Source) at bsh.Name.invokeMethod(Unknown Source) at bsh.BSHMethodInvocation.eval(Unknown Source) at bsh.BSHPrimaryExpression.eval(Unknown Source) at bsh.BSHPrimaryExpression.eval(Unknown Source) at bsh.Interpreter.eval(Unknown Source) at bsh.Interpreter.eval(Unknown Source) at bsh.Interpreter.eval(Unknown Source) at edu.internet2.middleware.grouper.app.gsh.ShellHelper.eval(ShellHelper.java:48) at edu.internet2.middleware.grouper.app.gsh.GrouperShell.run(GrouperShell.java:413) at edu.internet2.middleware.grouper.app.gsh.GrouperShell.grouperShellHelper(GrouperShell.java:217) at edu.internet2.middleware.grouper.app.gsh.GrouperShell.main(GrouperShell.java:147) at edu.internet2.middleware.grouper.app.gsh.GrouperShellWrapper.main(GrouperShellWrapper.java:16) Caused by: edu.internet2.middleware.subject.SourceUnavailableException: null, source: ldap, sql: null at edu.internet2.middleware.subject.provider.LdapSourceAdapter.searchHelper(LdapSourceAdapter.java:399) at edu.internet2.middleware.subject.provider.LdapSourceAdapter.search(LdapSourceAdapter.java:352) at edu.internet2.middleware.grouper.subj.SourcesXmlResolver$5.callLogic(SourcesXmlResolver.java:748) ... 27 more Caused by: java.lang.NullPointerException at edu.internet2.middleware.subject.provider.LdapSourceAdapter.searchHelper(LdapSourceAdapter.java:387) ... 29 more